LOC_Os02g08090.1


Description : component Sm-F of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG_01_0001499 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001499_tree ,
OG_02_0005319 (LandPlants) Phylogenetic Tree(s): OG_02_0005319_tree ,
OG_03_0007982 (SeedPlants) Phylogenetic Tree(s): OG_03_0007982_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g08090.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AT3G59810 No alias Small nuclear ribonucleoprotein family protein 0.04 Archaeplastida
AT4G30220 RUXF small nuclear ribonucleoprotein F 0.03 Archaeplastida
Cpa|evm.model.tig00001355.5 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 Archaeplastida
Cre03.g151750 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.03 Archaeplastida
Cre05.g241300 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
GSVIVT01003994001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
MA_26016g0010 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
Mp5g02830.1 No alias component LSm6 of U6-associated LSm accessory... 0.04 Archaeplastida
Mp6g01610.1 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.06 Archaeplastida
Pp3c12_17630V3.1 No alias small nuclear ribonucleoprotein F 0.03 Archaeplastida
Smo228181 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
Smo268399 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 Archaeplastida
Zm00001e025108_P001 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.07 Archaeplastida
AT4G30220 RUXF small nuclear ribonucleoprotein F 0.03 LandPlants
GSVIVT01003994001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 LandPlants
MA_26016g0010 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.02 LandPlants
Mp6g01610.1 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.06 LandPlants
Pp3c12_17630V3.1 No alias small nuclear ribonucleoprotein F 0.02 LandPlants
Smo228181 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 LandPlants
Zm00001e025108_P001 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.03 LandPlants
AT4G30220 RUXF small nuclear ribonucleoprotein F 0.03 SeedPlants
GSVIVT01003994001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 SeedPlants
MA_26016g0010 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.02 SeedPlants
Zm00001e025108_P001 No alias component Sm-F of U1/U2/U4/U5-associated Sm accessory... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 11 55
No external refs found!