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  5. LOC_Os04g14220.2

LOC_Os04g14220.2 (RPM1, RPS3, LOC_Os04g14220)


Aliases : RPM1, RPS3, LOC_Os04g14220

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 295.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g14220.2
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00205p00026120 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.06 OrthoFinder output from all 47 species
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.07 OrthoFinder output from all 47 species
AT1G58848 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G59218 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.07 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.03 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.29 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
GSVIVT01012168001 RPM1, RPS3 Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024101001 RPP13 Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026728001 No alias Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026745001 No alias Putative disease resistance protein At1g50180... 0.03 OrthoFinder output from all 47 species
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_26463 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09790.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g35210.1 LOC_Os02g35210 no description available(sp|q2r8l1|rga5s_orysj : 458.0) 0.04 OrthoFinder output from all 47 species
LOC_Os04g02860.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g11760.1 LOC_Os04g11760 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os04g11780.1 LOC_Os04g11780 no description available(sp|f7j0n2|rga5r_orysj : 115.0) 0.07 OrthoFinder output from all 47 species
LOC_Os04g21890.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07920.1 LOC_Os08g07920 no description available(sp|q2qzf1|pik6_orysj : 119.0) 0.05 OrthoFinder output from all 47 species
LOC_Os08g14800.1 LOC_Os08g14800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31780.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 415.0) 0.04 OrthoFinder output from all 47 species
LOC_Os09g09750.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os10g03570.1 LOC_Os10g03570 no description available(sp|q2r8l1|rga5s_orysj : 283.0) 0.07 OrthoFinder output from all 47 species
LOC_Os11g11950.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12040.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g12050.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12340.2 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os11g12350.1 LOC_Os11g12350 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g16510.1 LOC_Os11g16510 no description available(sp|p0do08|pikm2_orysj : 87.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g16530.2 HRT, RCY1, RPP8,... no description available(sp|f7j0n2|rga5r_orysj : 285.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g41170.1 LOC_Os11g41170 no description available(sp|p0do08|pikm2_orysj : 199.0) 0.04 OrthoFinder output from all 47 species
LOC_Os11g41210.1 LOC_Os11g41210 no description available(sp|q2r8l1|rga5s_orysj : 81.6) 0.09 OrthoFinder output from all 47 species
LOC_Os12g17130.1 LOC_Os12g17130 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g17420.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 165.0) 0.06 OrthoFinder output from all 47 species
LOC_Os12g17430.1 LOC_Os12g17430 no description available(sp|p0do08|pikm2_orysj : 108.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g17480.1 LOC_Os12g17480 no description available(sp|q2r8l1|rga5s_orysj : 343.0) 0.08 OrthoFinder output from all 47 species
LOC_Os12g17490.1 RPM1, RPS3,... no description available(sp|p0do08|pikm2_orysj : 309.0) 0.04 OrthoFinder output from all 47 species
LOC_Os12g29280.1 LOC_Os12g29280 Putative disease resistance protein RGA1 OS=Solanum... 0.07 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g025820.1.1 RPP13, Solyc04g025820 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g026110.4.1 RPP13, Solyc04g026110 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g005440.3.1 RPM1, RPS3,... RPM1 effector-triggered immunity CC-NLR-type effector receptor 0.05 OrthoFinder output from all 47 species
Zm00001e008806_P001 Zm00001e008806 no description available(sp|q2r8l1|rga5s_orysj : 238.0) 0.03 OrthoFinder output from all 47 species
Zm00001e011093_P001 ZAR1, Zm00001e011093 no description available(sp|f7j0n2|rga5r_orysj : 358.0) 0.04 OrthoFinder output from all 47 species
Zm00001e011354_P001 Zm00001e011354 no description available(sp|p0do08|pikm2_orysj : 121.0) 0.04 OrthoFinder output from all 47 species
Zm00001e024479_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e039751_P001 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR041118 Rx_N 27 104
IPR002182 NB-ARC 187 417
No external refs found!