LOC_Os04g11730.1 (LOC_Os04g11730)

Aliases : LOC_Os04g11730

Description : no hits & (original description: none)

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g11730.1

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0011.g012663	ATMBD6, MBD6	methylation reader *(MBD5-6) & original description: CDS=96-1676	0.06	OrthoFinder output from all 47 species
Dcu_g42606	MBD05, MBD5, ATMBD5	methylation reader *(MBD5-6) & original description: none	0.02	OrthoFinder output from all 47 species
MA_9351372g0010	No alias	methylation reader (MBD5-6)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022256	DUF3778	328	378
IPR001739	Methyl_CpG_DNA-bd	71	120

External Links

No external refs found!