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  5. LOC_Os04g11130.1

LOC_Os04g11130.1 (LOC_Os04g11130)


Aliases : LOC_Os04g11130

Description : defensin (PDF2)


Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g11130.1

Target Alias Description ECC score Gene Family Method Actions
AT2G02100 LCR69, PDF2.2 low-molecular-weight cysteine-rich 69 0.03 OrthoFinder output from all 47 species
AT2G31953 LCR76 low-molecular-weight cysteine-rich 76 0.05 OrthoFinder output from all 47 species
GSVIVT01036750001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_132614g0010 No alias defensin (PDF2) 0.03 OrthoFinder output from all 47 species
MA_5320g0010 PDF2.1, LCR70 defensin (PDF1). defensin (PDF2) 0.02 OrthoFinder output from all 47 species
Solyc07g007730.4.1 LCR69, PDF2.2,... defensin (PDF2) 0.03 OrthoFinder output from all 47 species
Solyc07g007750.3.1 LCR69, PDF2.2,... defensin (PDF2) 0.01 OrthoFinder output from all 47 species
Solyc11g006260.2.1 LCR74, PDF2.5,... defensin (PDF2) 0.05 OrthoFinder output from all 47 species
Zm00001e014145_P001 PDF2.1, LCR70,... defensin (PDF2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!