LOC_Os04g10240.1 (LOC_Os04g10240)


Aliases : LOC_Os04g10240

Description : no hits & (original description: none)


Gene families : OG0001593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001593_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g10240.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT1G04340 No alias HR-like lesion-inducing protein-related 0.04 OrthoFinder output from all 47 species
Adi_g078293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g05141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G056200.1 Ceric.08G056200 not classified & original description: pacid=50638124... 0.04 OrthoFinder output from all 47 species
Dcu_g07477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027731001 No alias No description available 0.06 OrthoFinder output from all 47 species
Nbi_g03349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40524 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c24_9580V3.1 Pp3c24_9580 HR-like lesion-inducing protein-related 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007560 No alias not classified & original description: CDS=1-456 0.02 OrthoFinder output from all 47 species
Smo169212 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo85994 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc09g089670.3.1 Solyc09g089670 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g07179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038982_P001 Zm00001e038982 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040580_P001 Zm00001e040580 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e042346_P001 Zm00001e042346 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008637 HR_lesion 1 138
No external refs found!