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Aliases : LOC_Os04g09710
Description : no hits & (original description: none)
Gene families : OG0001023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g09710.1 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g06200.1 | LOC_Os01g06200 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g20070.1 | LOC_Os02g20070 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g25140.1 | LOC_Os02g25140 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g25440.1 | LOC_Os02g25440 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g27630.1 | LOC_Os02g27630 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g04790.1 | LOC_Os03g04790 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g29660.1 | LOC_Os03g29660 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g33290.1 | LOC_Os03g33290 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g52550.1 | LOC_Os03g52550 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g06600.1 | LOC_Os04g06600 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g13290.1 | LOC_Os04g13290 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g19100.1 | LOC_Os04g19100 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g21380.1 | LOC_Os04g21380 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g23780.1 | LOC_Os04g23780 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g24390.1 | LOC_Os04g24390 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g28900.1 | LOC_Os04g28900 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g17040.1 | LOC_Os05g17040 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os05g17970.1 | LOC_Os05g17970 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os05g18910.1 | LOC_Os05g18910 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g20370.1 | LOC_Os05g20370 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g20820.1 | LOC_Os05g20820 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g32040.1 | LOC_Os05g32040 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g11540.1 | LOC_Os06g11540 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g27950.1 | LOC_Os06g27950 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g29060.1 | LOC_Os06g29060 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g11230.1 | LOC_Os07g11230 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g14970.1 | LOC_Os07g14970 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g20690.1 | LOC_Os07g20690 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g27820.1 | LOC_Os07g27820 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g07230.1 | LOC_Os08g07230 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g13560.1 | LOC_Os08g13560 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g23990.1 | LOC_Os08g23990 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g01350.1 | LOC_Os09g01350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g07250.1 | LOC_Os09g07250 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g08240.1 | LOC_Os09g08240 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g09800.1 | LOC_Os09g09800 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g11110.1 | LOC_Os09g11110 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os09g14740.1 | LOC_Os09g14740 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g15140.1 | LOC_Os09g15140 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g07720.1 | LOC_Os11g07720 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g22020.1 | LOC_Os11g22020 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g22690.1 | LOC_Os11g22690 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g22710.1 | LOC_Os11g22710 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g28560.1 | LOC_Os11g28560 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g28790.1 | LOC_Os11g28790 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g05500.1 | LOC_Os12g05500 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g16820.1 | LOC_Os12g16820 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g23640.1 | LOC_Os12g23640 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g43280.1 | LOC_Os12g43280 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |