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  5. LOC_Os02g07780.1

LOC_Os02g07780.1


Description : transcription factor (SBP)


Gene families : OG_01_0000102 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000102_tree ,
OG_02_0000092 (LandPlants) Phylogenetic Tree(s): OG_02_0000092_tree ,
OG_03_0000075 (SeedPlants) Phylogenetic Tree(s): OG_03_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g07780.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre01.g012200 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Cre09.g399289 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_20537g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c16_7480V3.1 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.02 Archaeplastida
Pp3c25_8630V3.1 No alias squamosa promoter binding protein-like 2 0.02 Archaeplastida
Pp3c6_6900V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e006686_P001 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e025436_P002 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e041822_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.02 LandPlants
MA_10427464g0020 No alias Squamosa promoter-binding-like protein 14 OS=Arabidopsis... 0.02 LandPlants
MA_10427464g0040 No alias transcription factor (SBP) 0.02 LandPlants
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 LandPlants
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.02 LandPlants
Zm00001e041822_P001 No alias transcription factor (SBP) 0.02 LandPlants
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.02 SeedPlants
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.02 SeedPlants
Solyc03g114850.4.1 No alias no hits & (original description: none) 0.01 SeedPlants
Zm00001e041822_P001 No alias transcription factor (SBP) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 68 141
No external refs found!