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  5. LOC_Os04g08290.1

LOC_Os04g08290.1 (LOC_Os04g08290)


Aliases : LOC_Os04g08290

Description : C2H2 zinc finger transcription factor


Gene families : OG0002003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g08290.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s05661p00002040 STOP1,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT5G22890 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
Ceric.06G007600.1 STOP1, Ceric.06G007600 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031459001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01034505001 STOP1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_11550 STOP1 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g44830.1 LOC_Os08g44830 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Msp_g08112 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02284 STOP1 C2H2-type subclass STOP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g11084 STOP1 C2H2-type subclass STOP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc11g017140.3.1 STOP1, Solyc11g017140 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 203 225
No external refs found!