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  5. LOC_Os04g07250.1

LOC_Os04g07250.1 (LOC_Os04g07250)


Aliases : LOC_Os04g07250

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g07250.1
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT5G45530 No alias Protein of unknown function (DUF594) 0.03 OrthoFinder output from all 47 species
Aspi01Gene22616.t1 Aspi01Gene22616 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G006000.1 Ceric.37G006000 not classified & original description: pacid=50616778... 0.03 OrthoFinder output from all 47 species
GSVIVT01014456001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015712001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_26934 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g24050.1 LOC_Os01g24050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g06900.1 LOC_Os04g06900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g01840.1 LOC_Os07g01840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g09570.1 LOC_Os08g09570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g25966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR007658 DUF594 620 669
IPR025315 DUF4220 48 391
No external refs found!