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  5. LOC_Os04g06990.1

LOC_Os04g06990.1 (LOC_Os04g06990)


Aliases : LOC_Os04g06990

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g06990.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT4G19090 No alias Protein of unknown function (DUF594) 0.03 OrthoFinder output from all 47 species
Aop_g25658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04305.t1 Aspi01Gene04305 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22608.t1 Aspi01Gene22608 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18623 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g08270.1 LOC_Os07g08270 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Pir_g39122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g094650.3.1 Solyc12g094650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g29720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 51 393
IPR007658 DUF594 627 675
No external refs found!