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  5. LOC_Os04g06900.1

LOC_Os04g06900.1 (LOC_Os04g06900)


Aliases : LOC_Os04g06900

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g06900.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014447001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g24050.1 LOC_Os01g24050 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g07250.1 LOC_Os04g07250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g25890.1 LOC_Os05g25890 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g01520.1 LOC_Os07g01520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g42080.1 LOC_Os11g42080 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010447 No alias not classified & original description: CDS=1-2712 0.03 OrthoFinder output from all 47 species
Zm00001e025982_P001 Zm00001e025982 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 48 392
No external refs found!