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  5. LOC_Os04g05070.1

LOC_Os04g05070.1 (LOC_Os04g05070)


Aliases : LOC_Os04g05070

Description : no hits & (original description: none)


Gene families : OG0001714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001714_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g05070.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00145p00085470 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G59760 No alias Protein of unknown function (DUF1635) 0.04 OrthoFinder output from all 47 species
Aev_g17006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03710 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g55746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g008080.3.1 Solyc11g008080 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e027626_P003 Zm00001e027626 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012862 DUF1635 100 176
No external refs found!