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  5. LOC_Os04g01690.3

LOC_Os04g01690.3 (ADC1, ARGDC, ARGDC1,...)


Aliases : ADC1, ARGDC, ARGDC1, SPE1, LOC_Os04g01690

Description : arginine decarboxylase


Gene families : OG0001452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g01690.3
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00148010 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT2G16500 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase 1 0.02 OrthoFinder output from all 47 species
Als_g20200 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Als_g56138 ADC1, ARGDC, ARGDC1, SPE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64047.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69293.t1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z147000.1 ADC2, SPE2,... EC_4.1 carbon-carbon lyase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g08893 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04009 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38761 ADC1, ARGDC, ARGDC1, SPE1 arginine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01284 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33380 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30080 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g054440.3.1 ADC2, SPE2,... arginine decarboxylase 0.05 OrthoFinder output from all 47 species
Tin_g31892 ADC2, SPE2, ATADC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 89 355
No external refs found!