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  5. LOC_Os04g01160.1

LOC_Os04g01160.1 (LOC_Os04g01160)


Aliases : LOC_Os04g01160

Description : ubiquitin protein ligase (WAV3)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g01160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00128070 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase EDA40... 0.02 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 OrthoFinder output from all 47 species
AT2G22680 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 OrthoFinder output from all 47 species
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.05 OrthoFinder output from all 47 species
Als_g15196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27926.t1 Aspi01Gene27926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015698 No alias not classified & original description: CDS=107-2713 0.03 OrthoFinder output from all 47 species
Cba_g23778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G060200.1 Ceric.09G060200 not classified & original description: pacid=50588484... 0.03 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.05 OrthoFinder output from all 47 species
GSVIVT01016259001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_01603 No alias ubiquitin protein ligase (WAV3) 0.05 OrthoFinder output from all 47 species
LOC_Os02g40664.1 LOC_Os02g40664 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g32740.1 LOC_Os10g32740 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g05684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11225g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g056140.4.1 Solyc05g056140 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e004621_P001 Zm00001e004621 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e008822_P002 Zm00001e008822 ubiquitin protein ligase (WAV3) 0.02 OrthoFinder output from all 47 species
Zm00001e012729_P001 Zm00001e012729 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040514_P001 Zm00001e040514 ubiquitin protein ligase (WAV3) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002035 VWF_A 280 394
No external refs found!