1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g63590.1

LOC_Os03g63590.1 (CPSF73-I, LOC_Os03g63590)


Aliases : CPSF73-I, LOC_Os03g63590

Description : component CPSF73/Ysh1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. nuclease CPSF73-I


Gene families : OG0003985 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003985_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g63590.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266610 CPSF73-I,... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 OrthoFinder output from all 47 species
Adi_g082729 CPSF73-I nuclease CPSF73-I & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14015 CPSF73-I nuclease CPSF73-I & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30369 CPSF73-I nuclease CPSF73-I & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03823 CPSF73-I nuclease CPSF73-I & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023351001 CPSF73-I RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.04 OrthoFinder output from all 47 species
Lfl_g08598 CPSF73-I nuclease CPSF73-I & original description: none 0.03 OrthoFinder output from all 47 species
MA_45580g0010 CPSF73-I component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Mp2g23780.1 CPSF73-I component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Ore_g10465 CPSF73-I nuclease CPSF73-I & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05005 CPSF73-I nuclease CPSF73-I & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30041 No alias nuclease CPSF73-I & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29577 CPSF73-I not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022712 Beta_Casp 265 386
IPR021718 CPSF73-100_C 496 694
IPR001279 Metallo-B-lactamas 42 207
IPR011108 RMMBL 400 464
No external refs found!