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  5. LOC_Os02g07190.1

LOC_Os02g07190.1


Description : Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus (sp|c6l7u1|lin1_lotja : 219.0)


Gene families : OG_01_0001418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001418_tree ,
OG_02_0001365 (LandPlants) Phylogenetic Tree(s): OG_02_0001365_tree ,
OG_03_0011468 (SeedPlants) Phylogenetic Tree(s): OG_03_0011468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g07190.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00231470 evm_27.TU.AmTr_v1... Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.03 Archaeplastida
MA_1171557g0010 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
MA_126120g0010 No alias Putative E3 ubiquitin-protein ligase LIN OS=Medicago... 0.03 Archaeplastida
MA_15009g0010 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.04 Archaeplastida
MA_394030g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7193588g0010 No alias No annotation 0.04 Archaeplastida
Solyc01g006380.2.1 No alias Putative E3 ubiquitin-protein ligase LIN OS=Medicago... 0.04 Archaeplastida
Solyc01g066740.3.1 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.04 Archaeplastida
Solyc07g020870.3.1 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
Zm00001e016398_P001 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.03 Archaeplastida
Zm00001e031427_P002 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus... 0.02 Archaeplastida
Gb_19331 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.01 LandPlants
MA_15009g0010 No alias Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus... 0.01 LandPlants
MA_7193588g0010 No alias No annotation 0.02 LandPlants
Zm00001e016398_P001 No alias ubiquitin E3 ligase (CERBERUS/LIN) 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!