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  5. LOC_Os03g62790.1

LOC_Os03g62790.1 (LOC_Os03g62790)


Aliases : LOC_Os03g62790

Description : Pirin-like protein OS=Solanum lycopersicum (sp|q9see4|pirl_sollc : 467.0)


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g62790.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012617 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04607 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031671001 No alias Pirin-like protein OS=Solanum lycopersicum 0.06 OrthoFinder output from all 47 species
Gb_07514 No alias Pirin-like protein OS=Solanum lycopersicum... 0.07 OrthoFinder output from all 47 species
Len_g23606 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10348 No alias transcriptional co-regulator *(Pirin) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 276 381
IPR003829 Pirin_N_dom 129 223
No external refs found!