LOC_Os03g62640.2 (LOC_Os03g62640)

Aliases : LOC_Os03g62640

Description : pre-mRNA-processing protein (LUC7)

Gene families : OG0004423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004423_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g62640.2
Cluster	HCCA: Cluster_376

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00192420	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
Aop_g12075	UNE6	pre-mRNA-processing protein *(LUC7) & original description: none	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021357.16	No alias	No description available	0.02	OrthoFinder output from all 47 species
Mp7g03530.1	UNE6	pre-mRNA-processing protein (LUC7)	0.02	OrthoFinder output from all 47 species
Zm00001e011667_P003	Zm00001e011667	pre-mRNA-processing protein (LUC7)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005685	U1 snRNP	IEA	Interproscan
BP	GO:0006376	mRNA splice site selection	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
CC	GO:0030532	small nuclear ribonucleoprotein complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097525	spliceosomal snRNP complex	None	Extended
CC	GO:0120114	Sm-like protein family complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004882	Luc7-rel	2	173
IPR004882	Luc7-rel	207	327

External Links

No external refs found!