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  5. LOC_Os03g62580.1

LOC_Os03g62580.1 (VPS9, ATVPS9A, VPS9A,...)


Aliases : VPS9, ATVPS9A, VPS9A, LOC_Os03g62580

Description : RAB5 guanine nucleotide exchange factor (VPS9)


Gene families : OG0004643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g62580.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037118001 VPS9, ATVPS9A, VPS9A Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR003123 VPS9 142 244
IPR041545 DUF5601 31 95
No external refs found!