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  5. LOC_Os03g62490.1

LOC_Os03g62490.1 (PHB1, ATPHB1, LOC_Os03g62490)


Aliases : PHB1, ATPHB1, LOC_Os03g62490

Description : Prohibitin-2, mitochondrial OS=Arabidopsis thaliana (sp|q9znt7|phb2_arath : 404.0)


Gene families : OG0002789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g62490.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g00787 PHB1, ATPHB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01193 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.39 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre02.g088000 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01027465001 PHB1, ATPHB1 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Pnu_g07645 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28993 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc10g008140.3.1 PHB1, ATPHB1,... Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g21133 PHB1, ATPHB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00443 PHB1, ATPHB1 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 40 215
No external refs found!