Aliases : LPA66, LOC_Os03g60690
Description : Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana (sp|a8mqa3|pp330_arath : 473.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os03g60690.1 | |
Cluster | HCCA: Cluster_176 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00166520 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
AT1G13410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G25360 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT3G13770 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G14730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G22690 | No alias | CONTAINS InterPro DOMAIN/s: Protein of unknown function... | 0.04 | OrthoFinder output from all 47 species | |
AT3G49740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G02750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G14850 | LOI1, MEF11 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G33170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G40405 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G52850 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g004703 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g21218 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g16829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g39237 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g28645 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g23475 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene52571.t1 | Aspi01Gene52571 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0081.g038640 | OTP86 | not classified & original description: CDS=63-2522 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g04691 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g19909 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g20788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g20884 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g67638 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g75137 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.07G000400.1 | Ceric.07G000400 | not classified & original description: pacid=50627195... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.17G054900.1 | DOT4, Ceric.17G054900 | not classified & original description: pacid=50617812... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.26G001100.1 | Ceric.26G001100 | not classified & original description: pacid=50598974... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001038.5 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dac_g19035 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g27999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g07839 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g16666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007811001 | No alias | Pentatricopeptide repeat-containing protein At3g22690... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007972001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01008407001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010654001 | No alias | Pentatricopeptide repeat-containing protein At4g38010... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012938001 | SLO1 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01015087001 | CRR2 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01017075001 | OTP82 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017378001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01017763001 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01018922001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01019231001 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021374001 | No alias | Pentatricopeptide repeat-containing protein At5g46460,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024915001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027504001 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01028022001 | No alias | Pentatricopeptide repeat-containing protein At3g62890... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031266001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01034655001 | No alias | Pentatricopeptide repeat-containing protein At5g04780,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036788001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_08863 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_11667 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16017 | CRR22 | RNA editing factor (MEF19) | 0.03 | OrthoFinder output from all 47 species | |
Gb_17734 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_18788 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
Gb_19924 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_36398 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Gb_37176 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
Gb_37820 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_39298 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g41650.1 | LOC_Os01g41650 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g63510.1 | LOC_Os03g63510 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g49185.1 | LOC_Os06g49185 | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g06650.1 | LOC_Os12g06650 | Pentatricopeptide repeat-containing protein At4g15720... | 0.04 | OrthoFinder output from all 47 species | |
Len_g05419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g10885 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g33524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g33779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g55702 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g58477 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g07412 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_6329g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g04201 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13328 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g13483 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g22924 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g26370 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Msp_g28226 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Msp_g28341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g33344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g41385 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g45751 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g20499 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g27949 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g31776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g12881 | RARE1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g18964 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g28389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12406 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g20675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g08791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g55596 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g01624 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo78092 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Smo90480 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
Smo92492 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g006920.4.1 | Solyc01g006920 | Pentatricopeptide repeat-containing protein At4g39530... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g090510.2.1 | Solyc01g090510 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g091610.1.1 | Solyc01g091610 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g097670.4.1 | EMB2261, Solyc01g097670 | RNA editing factor (ECD1) | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g065560.1.1 | Solyc02g065560 | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g068630.1.1 | Solyc02g068630 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g076700.1.1 | Solyc02g076700 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g079380.2.1 | CRR22, Solyc02g079380 | RNA editing factor (CRR22) | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g088650.1.1 | Solyc02g088650 | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g093380.1.1 | Solyc02g093380 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g097850.1.1 | Solyc03g097850 | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g115790.1.1 | CRR28, Solyc03g115790 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g116840.3.1 | Solyc03g116840 | RNA editing factor (OTP81) | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g009000.1.1 | Solyc04g009000 | RNA editing factor (SLO2) | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g063300.3.1 | Solyc04g063300 | Pentatricopeptide repeat-containing protein At3g26540... | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g076330.3.1 | CRR22, Solyc04g076330 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.07 | OrthoFinder output from all 47 species | |
Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g012630.2.1 | Solyc05g012630 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g005690.3.1 | Solyc06g005690 | Pentatricopeptide repeat-containing protein At5g59600... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g066080.1.1 | OTP85, Solyc06g066080 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g084580.1.1 | Solyc06g084580 | Pentatricopeptide repeat-containing protein At4g20770... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.05 | OrthoFinder output from all 47 species | |
Solyc07g055310.1.1 | Solyc07g055310 | Pentatricopeptide repeat-containing protein At2g41080... | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g009950.4.1 | Solyc09g009950 | RNA editing factor (MEF10) | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g059575.1.1 | Solyc09g059575 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g065710.1.1 | OTP86, Solyc09g065710 | RNA editing factor (OTP86) | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g007230.1.1 | Solyc11g007230 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc11g008940.1.1 | CRR2, Solyc11g008940 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g008970.1.1 | Solyc11g008970 | Pentatricopeptide repeat-containing protein At4g39952,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g017290.1.1 | Solyc11g017290 | Pentatricopeptide repeat-containing protein At1g31430... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g096510.3.1 | Solyc12g096510 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g20129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g44640 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e021453_P001 | CRR28, Zm00001e021453 | Pentatricopeptide repeat-containing protein At5g06540... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035817_P001 | Zm00001e035817 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041694_P001 | Zm00001e041694 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |