LOC_Os03g59290.1 (SMT1, CPH, LOC_Os03g59290)

Aliases : SMT1, CPH, LOC_Os03g59290

Description : sterol C-24 methyltransferase

Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g59290.1
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Aop_g01656	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ceric.05G018800.1	SMT1, CPH,...	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Cre12.g500500	SMT3	Lipid metabolism.phytosterols.campesterol...	0.02	OrthoFinder output from all 47 species
Dac_g25896	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Gb_03876	MAN2, AtMAN2	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Nbi_g01860	SMT1, CPH	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Nbi_g12420	SMT2, FRL1, CVP1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013705	Sterol_MeTrfase_C	260	324
IPR013216	Methyltransf_11	87	184

External Links

No external refs found!