LOC_Os03g58900.1 (LOC_Os03g58900)

Aliases : LOC_Os03g58900

Description : hydroxyproline-O-galactosyltransferase (GALT). AGP hydroxyproline O-galactosyltransferase

Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g58900.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G27120	No alias	Galactosyltransferase family protein	0.03	OrthoFinder output from all 47 species
Aev_g17641	No alias	hydroxyproline O-galactosyltransferase *(GALT) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0123.g048384	No alias	not classified & original description: CDS=1-2025	0.03	OrthoFinder output from all 47 species
Zm00001e011406_P001	Zm00001e011406	hydroxyproline-O-galactosyltransferase (GALT). AGP...	0.05	OrthoFinder output from all 47 species
Zm00001e036103_P002	GALT1, Zm00001e036103	beta-1,3-galactosyltransferase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030246	carbohydrate binding	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001079	Galectin_CRD	163	371
IPR002659	Glyco_trans_31	419	599

External Links

No external refs found!