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  5. LOC_Os03g57870.1

LOC_Os03g57870.1 (EMB251, RFC3, EMB161,...)


Aliases : EMB251, RFC3, EMB161, EMB2775, LOC_Os03g57870

Description : component RFC3 of PCNA sliding clamp loader complex


Gene families : OG0003475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57870.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00097520 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
Ala_g08186 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Ceric.21G050200.1 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.48 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.05 OrthoFinder output from all 47 species
Cre16.g679950 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
Dac_g27095 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01022436001 EMB251, RFC3,... Cell cycle.interphase.DNA... 0.06 OrthoFinder output from all 47 species
Gb_39448 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.04 OrthoFinder output from all 47 species
Len_g15759 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.04 OrthoFinder output from all 47 species
MA_10426511g0010 EMB251, RFC3,... Replication factor C subunit 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_168293g0010 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.03 OrthoFinder output from all 47 species
Mp6g16440.1 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.04 OrthoFinder output from all 47 species
Ore_g03221 EMB251, RFC3,... component *(RFC3) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
Sam_g50241 No alias component *(RFC3) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Solyc01g020440.3.1 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.03 OrthoFinder output from all 47 species
Zm00001e005947_P001 EMB251, RFC3,... component RFC3 of PCNA sliding clamp loader complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!