LOC_Os03g57790.1 (ATUBC2, UBC2, LOC_Os03g57790)


Aliases : ATUBC2, UBC2, LOC_Os03g57790

Description : ubiquitin-conjugating E2 protein


Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57790.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00126660 ATUBC2, UBC2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G14400 ATUBC1, UBC1 ubiquitin carrier protein 1 0.03 OrthoFinder output from all 47 species
AT2G02760 ATUBC2, UBC2 ubiquiting-conjugating enzyme 2 0.03 OrthoFinder output from all 47 species
Adi_g067091 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g04277 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Als_g13260 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07879 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g04287 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g06892 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g72306 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.3 ATUBC1, UBC1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre06.g294850 ATUBC1, UBC1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Dac_g24126 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Dde_g39457 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01020056001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.08 OrthoFinder output from all 47 species
GSVIVT01022467001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.07 OrthoFinder output from all 47 species
Gb_26842 ATUBC1, UBC1 ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
MA_16089g0010 ATUBC2, UBC2 ubiquitin-conjugating E2 protein 0.02 OrthoFinder output from all 47 species
Mp8g17960.1 ATUBC1, UBC1 ubiquitin-conjugating E2 protein 0.04 OrthoFinder output from all 47 species
Ore_g13697 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g34029 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006114 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species
Solyc03g113100.3.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Solyc06g070980.3.1 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.07 OrthoFinder output from all 47 species
Spa_g14709 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.07 OrthoFinder output from all 47 species
Tin_g22958 ATUBC1, UBC1 E2 ubiquiTin-conjugaTing enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011885_P001 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.05 OrthoFinder output from all 47 species
Zm00001e032886_P001 ATUBC2, UBC2,... ubiquitin-conjugating E2 protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!