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  5. LOC_Os03g57100.1

LOC_Os03g57100.1 (LOC_Os03g57100)


Aliases : LOC_Os03g57100

Description : Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana (sp|q9t042|pdi54_arath : 84.7)


Gene families : OG0005576 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005576_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g57100.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358579 No alias Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g15181 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-B)... 0.02 OrthoFinder output from all 47 species
Nbi_g05756 No alias Golgi-ER retrograde trafficking cargo receptor *(ERV-B)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007984 No alias not classified & original description: CDS=431-796 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012936 Erv_C 154 330
IPR039542 Erv_N 7 96
No external refs found!