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  5. LOC_Os03g56790.1

LOC_Os03g56790.1 (ADF6, ATADF6, LOC_Os03g56790)


Aliases : ADF6, ATADF6, LOC_Os03g56790

Description : actin-depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g56790.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Adi_g080661 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24519 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16665 ADF10 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009152 ADF7 actin-depolymerizing factor & original description: CDS=19-414 0.02 OrthoFinder output from all 47 species
GSVIVT01016593001 ATADF1, ADF1, atadf Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01027807001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Lfl_g24482 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00420 ADF11 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 21 143
No external refs found!