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  5. LOC_Os03g56700.1

LOC_Os03g56700.1 (LOC_Os03g56700)


Aliases : LOC_Os03g56700

Description : no hits & (original description: none)


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g56700.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT3G12870 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G56120 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38760.1 LOC_Os08g38760 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_10426247g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g20615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g066040.1.1 Solyc07g066040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g066540.1.1 Solyc07g066540 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g08515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005688_P001 Zm00001e005688 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!