LOC_Os03g56190.1 (LOC_Os03g56190)

Aliases : LOC_Os03g56190

Description : component COX6a of cytochrome c oxidase complex

Gene families : OG0004027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g56190.1
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
AT4G37830	No alias	cytochrome c oxidase-related	0.14	OrthoFinder output from all 47 species
Aev_g12411	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Aop_g16712	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.04	OrthoFinder output from all 47 species
Azfi_s0193.g057109	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.04	OrthoFinder output from all 47 species
Ceric.11G029100.1	Ceric.11G029100	component *(COX6a) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.137	No alias	Cellular respiration.oxidative...	0.02	OrthoFinder output from all 47 species
Cre12.g537450	No alias	Cellular respiration.oxidative...	0.06	OrthoFinder output from all 47 species
Dcu_g42667	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Ehy_g01846	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
GSVIVT01006593001	No alias	Cellular respiration.oxidative...	0.03	OrthoFinder output from all 47 species
Gb_15571	No alias	component COX6a of cytochrome c oxidase complex	0.09	OrthoFinder output from all 47 species
MA_9548380g0010	DRT102	component COX6a of cytochrome c oxidase complex	0.03	OrthoFinder output from all 47 species
Mp1g07110.1	No alias	component COX6a of cytochrome c oxidase complex	0.1	OrthoFinder output from all 47 species
Nbi_g12342	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
Ore_g06482	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.03	OrthoFinder output from all 47 species
Pp3c5_3360V3.1	Pp3c5_3360	cytochrome c oxidase-related	0.04	OrthoFinder output from all 47 species
Pp3c6_25050V3.1	Pp3c6_25050	cytochrome c oxidase-related	0.05	OrthoFinder output from all 47 species
Ppi_g00380	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.02	OrthoFinder output from all 47 species
Solyc02g091880.4.1	Solyc02g091880	component COX6a of cytochrome c oxidase complex	0.08	OrthoFinder output from all 47 species
Spa_g00803	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.04	OrthoFinder output from all 47 species
Tin_g03047	No alias	component *(COX6a) of cytochrome c oxidase complex &...	0.06	OrthoFinder output from all 47 species
Zm00001e005827_P001	Zm00001e005827	component COX6a of cytochrome c oxidase complex	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005743	mitochondrial inner membrane	IEA	Interproscan
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEA	Interproscan
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0045277	respiratory chain complex IV	None	Extended
CC	GO:0070069	cytochrome complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001349	Cyt_c_oxidase_su6a	21	89

External Links

No external refs found!

LOC_Os03g56190.1 (LOC_Os03g56190)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation