1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g55820.1

LOC_Os03g55820.1 (HCF164, LOC_Os03g55820)


Aliases : HCF164, LOC_Os03g55820

Description : HCF164 protein involved in cytochrome b6/f complex assembly


Gene families : OG0006010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006010_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55820.1

Target Alias Description ECC score Gene Family Method Actions
AT4G37200 HCF164 Thioredoxin superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g01048 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Als_g11520 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Aob_g01003 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Aspi01Gene48086.t1 HCF164, Aspi01Gene48086 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043076 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.18 HCF164 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g03170 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Dde_g01274 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Gb_14739 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.03 OrthoFinder output from all 47 species
MA_10429518g0010 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.02 OrthoFinder output from all 47 species
Ore_g25849 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Pir_g14034 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Sam_g28646 No alias protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Solyc07g064940.3.1 HCF164, Solyc07g064940 HCF164 protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
Spa_g17264 HCF164 protein involved in cytochrome b6/f complex assembly... 0.02 OrthoFinder output from all 47 species
Zm00001e011960_P001 HCF164, Zm00001e011960 HCF164 protein involved in cytochrome b6/f complex assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006559 L-phenylalanine catabolic process IEP HCCA
BP GO:0006570 tyrosine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 128 222
No external refs found!