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  5. LOC_Os03g55090.1

LOC_Os03g55090.1 (LOC_Os03g55090)


Aliases : LOC_Os03g55090

Description : Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum (sp|p53535|phsl2_soltu : 719.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 617.6)


Gene families : OG0000889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000889_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g55090.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00094310 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
AT3G46970 PHS2, ATPHS2 alpha-glucan phosphorylase 2 0.03 OrthoFinder output from all 47 species
Adi_g057114 PHS2, ATPHS2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G072500.1 PHS2, ATPHS2,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Cre07.g336950 PHS2, ATPHS2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Cre12.g552200 PHS2, ATPHS2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Ehy_g01637 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011504001 No alias Alpha-1,4 glucan phosphorylase L-1 isozyme,... 0.02 OrthoFinder output from all 47 species
Gb_38925 PHS2, ATPHS2 cytosolic alpha-glucan phosphorylase 0.02 OrthoFinder output from all 47 species
Solyc05g012510.3.1 Solyc05g012510 plastidial alpha-glucan phosphorylase 0.03 OrthoFinder output from all 47 species
Zm00001e005733_P001 Zm00001e005733 plastidial alpha-glucan phosphorylase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0008184 glycogen phosphorylase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000811 Glyco_trans_35 124 585
IPR000811 Glyco_trans_35 1 102
No external refs found!