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  5. LOC_Os03g54870.1

LOC_Os03g54870.1 (LOC_Os03g54870)


Aliases : LOC_Os03g54870

Description : subcluster I phosphatase


Gene families : OG0001419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g54870.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
Aev_g24427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37502 No alias subcluster I phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2459.g111530 No alias subcluster I phosphatase & original description: CDS=69-2267 0.03 OrthoFinder output from all 47 species
Dac_g20305 No alias subcluster I phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09782 No alias subcluster I phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20163 No alias subcluster I phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g069450.4.1 Solyc06g069450 subcluster I phosphatase 0.03 OrthoFinder output from all 47 species
Tin_g08292 No alias subcluster I phosphatase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 341 527
No external refs found!