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  5. LOC_Os03g53770.1

LOC_Os03g53770.1 (LOC_Os03g53770)


Aliases : LOC_Os03g53770

Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana (sp|q9lfd5|bpa1_arath : 165.0)


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53770.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00077520 evm_27.TU.AmTr_v1... Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G042200.1 Ceric.28G042200 not classified & original description: pacid=50570559... 0.02 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022464001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c19_9760V3.1 Pp3c19_9760 RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018884 No alias not classified & original description: CDS=125-916 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024053 No alias not classified & original description: CDS=195-929 0.02 OrthoFinder output from all 47 species
Sam_g07450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012169_P002 Zm00001e012169 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 76
No external refs found!