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  5. LOC_Os03g53540.1

LOC_Os03g53540.1 (LOC_Os03g53540)


Aliases : LOC_Os03g53540

Description : no hits & (original description: none)


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53540.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g01868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04896.t1 Aspi01Gene04896 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G040700.1 Ceric.03G040700 not classified & original description: pacid=50571909... 0.03 OrthoFinder output from all 47 species
Ehy_g12322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_32616 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g44410.1 LOC_Os05g44410 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10279500g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_94444g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g02560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g120920.1.1 Solyc03g120920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 10 93
No external refs found!