LOC_Os03g53300.2 (LOC_Os03g53300)


Aliases : LOC_Os03g53300

Description : no hits & (original description: none)


Gene families : OG0007654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007654_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g53300.2
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AT1G62250 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.12 OrthoFinder output from all 47 species
Adi_g110483 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28480 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g63732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20675 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene06157.t1 Aspi01Gene06157 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008705 No alias not classified & original description: CDS=586-1212 0.09 OrthoFinder output from all 47 species
Ceric.07G099200.1 Ceric.07G099200 not classified & original description: pacid=50627301... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022080.4 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g16491 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g20600 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g17669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012704001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_41552 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g04507 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435696g0010 No alias BTB/POZ domain-containing protein At2g46260... 0.03 OrthoFinder output from all 47 species
Mp5g15200.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g12765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24785 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g03260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080780.3.1 Solyc02g080780 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Spa_g51672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12658 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e005645_P001 Zm00001e005645 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!