LOC_Os03g52940.1 (LOC_Os03g52940)


Aliases : LOC_Os03g52940

Description : no hits & (original description: none)


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g52940.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00043220 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00105p00150760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G06980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT2G23690 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT4G02090 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT5G66580 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g012199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23035 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g24840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g57274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13906.t1 Aspi01Gene13906 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34873.t1 Aspi01Gene34873 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36874.t1 Aspi01Gene36874 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36885.t1 Aspi01Gene36885 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36907.t1 Aspi01Gene36907 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36924.t1 Aspi01Gene36924 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36930.t1 Aspi01Gene36930 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36975.t1 Aspi01Gene36975 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65675.t1 Aspi01Gene65675 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65680.t1 Aspi01Gene65680 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene68688.t1 Aspi01Gene68688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68691.t1 Aspi01Gene68691 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68695.t1 Aspi01Gene68695 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68697.t1 Aspi01Gene68697 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68698.t1 Aspi01Gene68698 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68699.t1 Aspi01Gene68699 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68702.t1 Aspi01Gene68702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68723.t1 Aspi01Gene68723 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038858 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Cba_g28165 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g42363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59869 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g59870 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.14G027400.1 Ceric.14G027400 not classified & original description: pacid=50633616... 0.03 OrthoFinder output from all 47 species
Ceric.14G096700.1 Ceric.14G096700 not classified & original description: pacid=50634186... 0.03 OrthoFinder output from all 47 species
Ceric.14G096800.1 Ceric.14G096800 not classified & original description: pacid=50633991... 0.02 OrthoFinder output from all 47 species
Ceric.14G097000.1 Ceric.14G097000 not classified & original description: pacid=50633954... 0.02 OrthoFinder output from all 47 species
Ceric.14G097100.1 Ceric.14G097100 not classified & original description: pacid=50633776... 0.02 OrthoFinder output from all 47 species
Ceric.16G045200.1 Ceric.16G045200 not classified & original description: pacid=50588981... 0.02 OrthoFinder output from all 47 species
Ceric.26G065000.1 Ceric.26G065000 not classified & original description: pacid=50598973... 0.04 OrthoFinder output from all 47 species
Ceric.26G065100.1 Ceric.26G065100 not classified & original description: pacid=50599287... 0.03 OrthoFinder output from all 47 species
Ceric.29G014700.1 Ceric.29G014700 not classified & original description: pacid=50624719... 0.03 OrthoFinder output from all 47 species
Dac_g07714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013456001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01021218001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.05 OrthoFinder output from all 47 species
Gb_05757 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_05765 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_05766 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_35301 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35304 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_41646 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19880.1 LOC_Os01g19880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g19260.1 LOC_Os03g19260 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g07240.1 LOC_Os05g07240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g48680.1 LOC_Os06g48680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10094 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10165933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10428693g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432844g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_112931g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119175g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_120551g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_121280g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_24094g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4985671g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_76101g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87298g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9762162g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g03220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g18590.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23271 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g18144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60781 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000026 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Solyc01g079550.2.1 Solyc01g079550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g109250.2.1 Solyc01g109250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g007370.1.1 Solyc06g007370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g11387 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50737 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005612_P001 Zm00001e005612 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011957_P001 Zm00001e011957 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 170
No external refs found!