LOC_Os03g52130.1 (LOC_Os03g52130)


Aliases : LOC_Os03g52130

Description : no hits & (original description: none)


Gene families : OG0007002 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g52130.1

Target Alias Description ECC score Gene Family Method Actions
AT1G49975 No alias INVOLVED IN: photosynthesis; LOCATED IN: photosystem I,... 0.03 OrthoFinder output from all 47 species
Aop_g13181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0014.g013526 No alias not classified & original description: CDS=1-324 0.04 OrthoFinder output from all 47 species
Dcu_g14153 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g38049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15759 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g22786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_6168g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g09520.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g38120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50895 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e005575_P001 Zm00001e005575 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008796 PSAN 45 94
No external refs found!