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Aliases : LOC_Os03g51840
Description : Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana (sp|p0c8a0|pp275_arath : 473.0)
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00205450 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g25210,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00003p00209480 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00121040 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g77360,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00156340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00045650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g52640,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00096p00019400 | No alias | Pentatricopeptide repeat-containing protein At5g11310,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00105p00044870 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00029960 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g15010,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00084460 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27800,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00131p00098210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g13040,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00142p00073110 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g73400,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G20300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G74900 | OTP43 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G80550 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G04130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G16010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G60050 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G61360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G62470 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G14820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15010 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G43820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G65820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g013918 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023342 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01020 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g03187 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g06010 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g25883 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07362 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15680 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22080 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01835 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g11133 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15608 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26096 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13623.t1 | Aspi01Gene13623 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27701.t1 | EMB2261, Aspi01Gene27701 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46984.t1 | Aspi01Gene46984 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene59816.t1 | EMB2261, Aspi01Gene59816 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene64236.t1 | Aspi01Gene64236 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0333.g065453 | No alias | not classified & original description: CDS=1-1836 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10252 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G082800.1 | Ceric.09G082800 | not classified & original description: pacid=50587508... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G084700.1 | Ceric.23G084700 | not classified & original description: pacid=50610091... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G045100.1 | Ceric.24G045100 | not classified & original description: pacid=50628969... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07047 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g11222 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01694 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03049 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g03918 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05532 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g08151 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g32634 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g39023 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g02250 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g07270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12312 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23072 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13495 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14509 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17496 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010329001 | No alias | Pentatricopeptide repeat-containing protein At3g04130,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014289001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017111001 | No alias | Pentatricopeptide repeat-containing protein At3g16010... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017293001 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026360001 | No alias | Pentatricopeptide repeat-containing protein At5g18390,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026463001 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029740001 | No alias | Pentatricopeptide repeat-containing protein At3g62470,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06907 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11871 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_12874 | No alias | Pentatricopeptide repeat-containing protein At3g61360... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_13617 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19758 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20376 | No alias | group-II intron mitochondrial splicing factor (MISF68) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20750 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22860 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23459 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_31784 | No alias | Pentatricopeptide repeat-containing protein At3g62470,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_32987 | No alias | Pentatricopeptide repeat-containing protein At5g18390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41835 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g52220.1 | LOC_Os02g52220 | Pentatricopeptide repeat-containing protein At1g73400,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g11020.1 | LOC_Os03g11020 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g53490.1 | LOC_Os03g53490 | Pentatricopeptide repeat-containing protein At3g22670,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g28180.1 | LOC_Os08g28180 | Pentatricopeptide repeat-containing protein At2g13420,... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29766 | OTP43 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10219080g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10433557g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27800,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_355286g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_38485g0010 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_387336g0010 | No alias | Pentatricopeptide repeat-containing protein At3g22670,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_455059g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8206159g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_929381g0010 | OTP43 | OTP43 mitochondrial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_933431g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20300,... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g20290.1 | No alias | Pentatricopeptide repeat-containing protein At3g06920... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g08945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03184 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29941 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14954 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g006850.1.1 | Solyc01g006850 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g097730.4.1 | Solyc01g097730 | Pentatricopeptide repeat-containing protein At3g60050... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g112560.4.1 | Solyc03g112560 | Pentatricopeptide repeat-containing protein At1g80550,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g116540.1.1 | Solyc03g116540 | Pentatricopeptide repeat-containing protein At1g52640,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g117570.3.1 | Solyc03g117570 | Pentatricopeptide repeat-containing protein At1g80880,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g076370.4.1 | Solyc04g076370 | Pentatricopeptide repeat-containing protein At2g27800,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g081950.4.1 | Solyc04g081950 | Pentatricopeptide repeat-containing protein At1g20300,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc05g008330.3.1 | Solyc05g008330 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g082390.3.1 | Solyc09g082390 | Pentatricopeptide repeat-containing protein At3g22670,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g097840.2.1 | Solyc09g097840 | Pentatricopeptide repeat-containing protein At5g18390,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g043100.2.1 | Solyc12g043100 | group-II intron mitochondrial splicing factor (MISF68) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09961 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005446_P003 | Zm00001e005446 | group-II intron mitochondrial splicing factor (MISF68) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005758_P001 | Zm00001e005758 | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013118_P001 | Zm00001e013118 | Pentatricopeptide repeat-containing protein At3g61360... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021940_P001 | Zm00001e021940 | Pentatricopeptide repeat-containing protein At5g18390,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025816_P001 | Zm00001e025816 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028873_P001 | Zm00001e028873 | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031478_P001 | Zm00001e031478 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036305_P001 | Zm00001e036305 | Pentatricopeptide repeat-containing protein At3g25210,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |