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  5. LOC_Os03g50480.1

LOC_Os03g50480.1 (PGM3, LOC_Os03g50480)


Aliases : PGM3, LOC_Os03g50480

Description : cytosolic phosphoglucomutase


Gene families : OG0002065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50480.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g023050 PGM, PGM1, STF1, ATPGMP EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g25147 PGM3 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053528 PGM3 EC_5.4 intramolecular transferase & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021105.50 PGM, PGM1, STF1, ATPGMP Phosphoglucomutase, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021105.51 PGM, PGM1, STF1, ATPGMP Enzyme classification.EC_5 isomerases.EC_5.4... 0.03 OrthoFinder output from all 47 species
GSVIVT01011700001 PGM2 Carbohydrate metabolism.sucrose... 0.03 OrthoFinder output from all 47 species
Gb_10986 PGM3 cytosolic phosphoglucomutase 0.04 OrthoFinder output from all 47 species
Lfl_g10153 PGM3 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g10560.1 PGM3 cytosolic phosphoglucomutase 0.07 OrthoFinder output from all 47 species
Nbi_g12934 PGM3 EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31097 PGM3 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17636 No alias EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g045340.3.1 PGM3, Solyc04g045340 cytosolic phosphoglucomutase 0.04 OrthoFinder output from all 47 species
Spa_g07221 PGM3 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005452_P001 PGM3, Zm00001e005452 cytosolic phosphoglucomutase 0.08 OrthoFinder output from all 47 species
Zm00001e012180_P001 PGM3, Zm00001e012180 cytosolic phosphoglucomutase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEA Interproscan
BP GO:0071704 organic substance metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005843 A-D-PHexomutase_C 480 546
IPR005846 A-D-PHexomutase_a/b/a-III 316 439
IPR005844 A-D-PHexomutase_a/b/a-I 17 164
IPR005845 A-D-PHexomutase_a/b/a-II 200 308
No external refs found!