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Aliases : LOC_Os03g50430
Description : RNA editing factor (OZ-type)
Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g50430.1 | |
| Cluster | HCCA: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00170p00058310 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT1G48570 | No alias | zinc finger (Ran-binding) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G53460 | No alias | BEST Arabidopsis thaliana protein match is: Ran BP2/NZF... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G55040 | No alias | zinc finger (Ran-binding) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g108029 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20942 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11397 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g19541 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15963 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0725.g083826 | No alias | RNA editing factor *(OZ) & original description: CDS=182-2308 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G046600.1 | Ceric.26G046600 | RNA editing factor *(OZ) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g11704 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g11382 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04668 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18300 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18431 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18840 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000088001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008444001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05351 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38905 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g10630.1 | LOC_Os01g10630 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39763 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428960g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436123g0010 | No alias | RNA editing factor (OZ-type) | 0.03 | OrthoFinder output from all 47 species | |
| MA_24584g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_7499122g0010 | No alias | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| MA_9100264g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g05510.1 | No alias | RNA editing factor (OZ-type) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03681 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g04568 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g00990 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55843 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07101 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo438605 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g099230.3.1 | Solyc01g099230 | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g007440.3.1 | Solyc10g007440 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11918 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g20697 | No alias | RNA ediTing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
| CC | GO:0030896 | checkpoint clamp complex | IEP | HCCA |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
| No external refs found! |