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Aliases : LOC_Os03g50120
Description : RNA editing factor (OZ-type)
Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os03g50120.1 | |
| Cluster | HCCA: Cluster_60 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G55040 | No alias | zinc finger (Ran-binding) family protein | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g054823 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108029 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g20942 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g48039 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15963 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12859 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0014.g013544 | No alias | RNA editing factor *(OZ) & original description: CDS=1-2409 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0198.g057411 | No alias | RNA editing factor *(OZ) & original description: CDS=1-3054 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g14180 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G001300.1 | Ceric.03G001300 | RNA editing factor *(OZ) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G046600.1 | Ceric.26G046600 | RNA editing factor *(OZ) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22806 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02287 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18300 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000088001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01008444001 | No alias | Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014166001 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| Gb_13912 | No alias | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38905 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g10630.1 | LOC_Os01g10630 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g06216 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g18415 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436123g0010 | No alias | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436123g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g05510.1 | No alias | RNA editing factor (OZ-type) | 0.14 | OrthoFinder output from all 47 species | |
| Msp_g19206 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15706 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03681 | No alias | RNA editing factor *(OZ) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15553 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g55843 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g06378 | No alias | RNA editing factor *(OZ) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g07101 | No alias | RNA editing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g50896 | No alias | RNA editing factor *(OZ) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g099230.3.1 | Solyc01g099230 | RNA editing factor (OZ-type) | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20697 | No alias | RNA ediTing factor *(OZ) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012200_P002 | Zm00001e012200 | RNA editing factor (OZ-type) | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | HCCA |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |