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  5. LOC_Os03g49990.1

LOC_Os03g49990.1 (RGA2, GAI, LOC_Os03g49990)


Aliases : RGA2, GAI, LOC_Os03g49990

Description : DELLA-type gibberellin signal transducer. transcription factor (GRAS). transcription factor (DELLA)


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49990.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00140480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00140500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
AT1G14920 RGA2, GAI GRAS family transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G17490 RGL3 RGA-like protein 3 0.03 OrthoFinder output from all 47 species
Aev_g02589 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39145 RGA, RGA1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26688 RGA2, GAI transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22059 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene68508.t1 RGA2, GAI,... transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029812 RGL2 GRAS-type transcription factor & original description: CDS=1-2046 0.03 OrthoFinder output from all 47 species
Cba_g20248 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09377 RGA2, GAI transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38769 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07760 RGL2 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14093 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030735001 RGL1, RGL RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Len_g10740 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g20660.1 RGA2, GAI DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
Msp_g15492 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31090 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37454 RGA2, GAI GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g20507 RGA2, GAI transcription factor *(DELLA) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27974 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g32765 RGA, RGA1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37064 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g08839 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11330 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002822 RGA, RGA1 transcription factor *(DELLA) & original description: CDS=1-2391 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Smo122441 RGL2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Smo139506 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Smo88990 SCR, SGR1 External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Spa_g01866 RGA2, GAI GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20961 RGA, RGA1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37316 RGL2 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g40110 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e005412_P001 RGA, RGA1, Zm00001e005412 DELLA-type gibberellin signal transducer. transcription... 0.06 OrthoFinder output from all 47 species
Zm00001e012213_P001 RGA2, GAI, Zm00001e012213 DELLA-type gibberellin signal transducer. transcription... 0.05 OrthoFinder output from all 47 species
Zm00001e020330_P001 RGA2, GAI, Zm00001e020330 DELLA-type gibberellin signal transducer. transcription... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005202 TF_GRAS 241 621
IPR021914 TF_DELLA_N 39 113
No external refs found!