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  5. LOC_Os03g49490.1

LOC_Os03g49490.1 (LOC_Os03g49490)


Aliases : LOC_Os03g49490

Description : no hits & (original description: none)


Gene families : OG0001666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49490.1

Target Alias Description ECC score Gene Family Method Actions
AT5G49710 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g01172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08137.t3 Aspi01Gene08137 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50180.t1 Aspi01Gene50180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009113 No alias not classified & original description: CDS=292-1281 0.03 OrthoFinder output from all 47 species
Cba_g09713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G050400.1 Ceric.35G050400 not classified & original description: pacid=50582077... 0.02 OrthoFinder output from all 47 species
Dde_g03738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008885001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01009149001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_00979 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_00980 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g54080.1 LOC_Os02g54080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g00945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436897g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g11270.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g15664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g076110.4.1 Solyc04g076110 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc11g030390.2.1 Solyc11g030390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g39377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016055_P002 Zm00001e016055 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!