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  5. LOC_Os03g48520.1

LOC_Os03g48520.1 (LOC_Os03g48520)


Aliases : LOC_Os03g48520

Description : no hits & (original description: none)


Gene families : OG0000141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g48520.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00204490 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G48240 No alias Octicosapeptide/Phox/Bem1p family protein 0.01 OrthoFinder output from all 47 species
Adi_g055420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015494001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
Msp_g15028 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Spa_g18273 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Tin_g19353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 20 106
No external refs found!