LOC_Os03g48080.1 (LOC_Os03g48080)


Aliases : LOC_Os03g48080

Description : no hits & (original description: none)


Gene families : OG0001683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001683_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g48080.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00217810 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G64400 No alias CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625);... 0.06 OrthoFinder output from all 47 species
Adi_g023757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g102909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g06404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0288.g063220 No alias not classified & original description: CDS=209-676 0.02 OrthoFinder output from all 47 species
Cba_g67801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G029900.1 Ceric.01G029900 not classified & original description: pacid=50592229... 0.04 OrthoFinder output from all 47 species
Dcu_g38060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22200 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005288_P002 Zm00001e005288 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR010625 CHCH 100 133
No external refs found!