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  5. LOC_Os03g47830.1

LOC_Os03g47830.1 (AGO5, LOC_Os03g47830)


Aliases : AGO5, LOC_Os03g47830

Description : Protein argonaute 11 OS=Oryza sativa subsp. japonica (sp|q10f39|ago11_orysj : 1605.0)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g47830.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.02 OrthoFinder output from all 47 species
Aev_g10073 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Als_g41650 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19810.t1 AGO7, ZIP,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28463.t1 AGO1, Aspi01Gene28463 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aspi01Gene28463.t2 Aspi01Gene28463 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07096 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001941001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Gb_13719 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g12529 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_47087g0010 AGO4, OCP11 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Pnu_g11536 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo98227 AGO1 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Zm00001e011432_P001 AGO5, Zm00001e011432 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 138 259
IPR003165 Piwi 542 847
IPR032473 Argonaute_Mid_dom 445 523
IPR003100 PAZ_dom 310 379
IPR032472 ArgoL2 388 434
No external refs found!