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  5. LOC_Os03g46454.1

LOC_Os03g46454.1 (ZIP10, LOC_Os03g46454)


Aliases : ZIP10, LOC_Os03g46454

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g46454.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00045670 ATZIP6, ZIP6,... Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00182180 ATIRT1, IRT1,... Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
AMTR_s00032p00184330 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
AT2G04032 ZIP7 zinc transporter 7 precursor 0.01 OrthoFinder output from all 47 species
AT4G19680 IRT2, ATIRT2 iron regulated transporter 2 0.04 OrthoFinder output from all 47 species
AT4G19690 ATIRT1, IRT1 iron-regulated transporter 1 0.03 OrthoFinder output from all 47 species
Adi_g079780 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19920 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G032200.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G032400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G012600.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G034500.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000475.13 No alias Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
Dcu_g00948 ZIP10 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03468 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012141001 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
GSVIVT01014337001 ATIRT1, IRT1 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
GSVIVT01024696001 ATZIP6, ZIP6 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
GSVIVT01026252001 ZIP10 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Gb_06502 ZIP10 metal cation transporter (ZIP) 0.01 OrthoFinder output from all 47 species
Nbi_g18185 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g28648 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11827 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c18_9640V3.1 Pp3c18_9640 zinc transporter 8 precursor 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006456 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description:... 0.04 OrthoFinder output from all 47 species
Smo231997 ATZIP4, ZIP4 Solute transport.carrier-mediated transport.ZIP... 0.03 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Solyc07g043230.3.1 ZIP3, Solyc07g043230 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e006463_P001 ZIP10, Zm00001e006463 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e031284_P002 ATZIP4, ZIP4,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003689 ZIP 2 231
No external refs found!