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  5. LOC_Os03g45210.1

LOC_Os03g45210.1 (LOC_Os03g45210)


Aliases : LOC_Os03g45210

Description : cysteine oxidase (PCO)


Gene families : OG0000819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g45210.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Adi_g084362 No alias cysteine oxidase *(PCO) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09268.t1 Aspi01Gene09268 cysteine oxidase *(PCO) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G084700.1 Ceric.02G084700 cysteine oxidase *(PCO) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g08206 No alias cysteine oxidase *(PCO) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009075001 No alias Plant cysteine oxidase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Msp_g11100 No alias cysteine oxidase *(PCO) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04639 No alias cysteine oxidase *(PCO) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05769 No alias cysteine oxidase *(PCO) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16109 No alias cysteine oxidase *(PCO) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g067440.3.1 Solyc02g067440 cysteine oxidase (PCO) 0.02 OrthoFinder output from all 47 species
Solyc03g113130.3.1 Solyc03g113130 cysteine oxidase (PCO) 0.03 OrthoFinder output from all 47 species
Zm00001e003400_P001 Zm00001e003400 cysteine oxidase (PCO) 0.02 OrthoFinder output from all 47 species
Zm00001e005238_P002 Zm00001e005238 cysteine oxidase (PCO) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012864 PCO/ADO 144 359
No external refs found!