LOC_Os03g44440.1 (ATCNGC9, CNGC9, LOC_Os03g44440)

Aliases : ATCNGC9, CNGC9, LOC_Os03g44440

Description : cyclic nucleotide-gated cation channel (CNGC)

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g44440.1

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene70565.t1	CNGC15,...	cyclic nucleotide-gated cation channel *(CNGC) &...	0.01	OrthoFinder output from all 47 species
Cba_g38296	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Dcu_g36527	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Nbi_g01306	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.01	OrthoFinder output from all 47 species
Nbi_g30846	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08376	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g23383	DND2, CNGC4,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g47165	DND1, ATCNGC2, CNGC2	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	93	416

External Links

No external refs found!