LOC_Os02g05450.1

Description : transcription factor (PHD)

Gene families : OG_01_0001716 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001716_tree ,
OG_02_0001846 (LandPlants) Phylogenetic Tree(s): OG_02_0001846_tree ,
OG_03_0001493 (SeedPlants) Phylogenetic Tree(s): OG_03_0001493_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g05450.1
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01037894001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Mp4g02060.1	No alias	transcription factor (PHD)	0.04	Archaeplastida
Zm00001e019808_P001	No alias	transcription factor (PHD)	0.03	Archaeplastida
GSVIVT01037894001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	LandPlants
Mp4g02060.1	No alias	transcription factor (PHD)	0.04	LandPlants
Zm00001e013656_P001	No alias	transcription factor (PHD)	0.05	LandPlants
GSVIVT01037894001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	SeedPlants
Zm00001e013656_P001	No alias	transcription factor (PHD)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	444	490

External Links

No external refs found!